PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS15015 FitnessBrowser__azobra:AZOBR_RS15015 (621 amino acids)

SeqID: AZOBR_RS15015 FitnessBrowser__azobra:AZOBR_RS15015
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595550: dihydroxy-acid dehydratase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS15015 FitnessBrowser__azobra:AZOBR_RS15015
MPHYRSRTSTHGRNMAGARGLWRATGMKDGDFGKPIIAIANSFTQFVPGHVHLKDLGQLV
AREIEKAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSRELIADAVEYMVNAHCADALVCIS
NCDKITPGMLMAAMRLNIPAVFVSGGPMEAGKVNWRGKTKAVDLIDAMVAAADPTVSDEE
AAVMERGSCPTCGSCSGMFTANSMNCLTEALGLSLPGNGTILATHADRKELFLAAGRMAV
ELCRRWYQEEDATALPRGIATFEAFENAMTLDIAMGGSTNTVLHLLAAAQEGQVPFTMAD
IDRLSRRVPNVCKVAPAVSDVHIEDVHKAGGIFGILGELDRGGLLNRDVATVHAKTLGDA
LDRWDVKRTQDEGVHTMFKAAPGGIPTTIAFSQEKRWPELDLDRDKGVIRSVDSAFSKDG
GLAVLFGNIAEKGCIVKTAGVDASNLVFAGPARVFESQDAAVEAILGDTVKAGDVVVIRY
EGPRGGPGMQEMLYPTSYLKSKGLGKACALVTDGRFSGGTSGLSIGHASPEAAQGGAIGL
VQDGDRIEIDIPNRKINLALSDEELQRRRDAENAKGADAWKPANRNRVVSPALRAYAALT
TSADRGAVRDVSQVEGIAMKR