PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS15695 FitnessBrowser__azobra:AZOBR_RS15695 (312 amino acids)

SeqID: AZOBR_RS15695 FitnessBrowser__azobra:AZOBR_RS15695
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2494084: Glycerate dehydrogenase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS15695 FitnessBrowser__azobra:AZOBR_RS15695
MKPEILLVESMMPDIEAALDAGYTVHRLAGAPDRDQLVAEVGPRVRAVVTGGGTGVSNAI
MDACPNLGIVAINGVGTDAVDLKHAAGRGVRVTNTPDVLTDDVADLAIGLMIAGSRRMMV
GDRFVRAGRWPGGGLPLARKVTGKRLGILGLGRIGMAIAQRAAGFGMDIAYTNRKPRSDV
PYRFVASPVDLARESDILIVAASAGPDARNMVNRAVIEALGPDGLLVNVARGAVVDEPEL
VAALADGRLGGAALDVFANEPHAPEALFGLDNVVLQPHQASATVETRMAMGNLVLANLSA
FFAGQPLPTAVV