PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS23550 AZOBR_RS23550 tetrathionate reductase subunit B (250 amino acids)

SeqID: AZOBR_RS23550 AZOBR_RS23550 tetrathionate reductase subunit B
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [1 internal helix found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 77416667: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    Periplasmic            4.99
    CytoplasmicMembrane    4.90
    Extracellular          0.10
    OuterMembrane          0.00
    Cytoplasmic            0.00
  Final Prediction:
    Unknown (This protein may have multiple localization sites.)

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS23550 AZOBR_RS23550 tetrathionate reductase subunit B
MDRSRRNFCLGAGAATIGAATVAAMPAAAAPSAAPLRRDGNPAHRWAMVVDVRKCVGCQA
CTVACIMENDVPENSFRTIVSTYEVTEQGKAGSYMLPRLCNHCEDPPCIPVCPTGATFQR
RDGIVVVDNTVCVGCAYCVQACPYDARFINHETQTADKCTFCVHRVEAGLLPACVETCVG
GARIFGDLNDPDSAVATLVREENPKVLKPEQGTQPRVFYLGLDPRFQGKVDGTPTLWRPS
RETHAQKEHA