PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on AZOBR_RS31275 FitnessBrowser__azobra:AZOBR_RS31275 (501 amino acids)

SeqID: AZOBR_RS31275 FitnessBrowser__azobra:AZOBR_RS31275
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 61252084: Polyol:NADP oxidoreductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>AZOBR_RS31275 FitnessBrowser__azobra:AZOBR_RS31275
MPLLSRESLAAGAFDVAHTAGAPRLPVTILQIGDGNFLRGFVDWMVDVANGAGLMSAGVA
IAQPLDQGVAGLLNAQEGLYTVLLRGIEQGKEVESRRVVSCVSDALNPYAEWDRMLALAT
SPALRFLVSNTTEAGIADVAEPYTPGACQQSFPAKVAALLHARFTALGGTPDSGLVLLPC
ELIEANGAKLKRIVLAHAKRWGLESGFAAWVEAHNHFLNTLVDRIVPGYPRDEAEALAAT
WGYEDPLAVTGEPFHVWVIEGPAALAEEFPLHKAGLNVVWTDDLKPYRTRKVRILNGAHT
ASALAAFVAGVDTVKGMMDDATLSAYLNTVMFGEIVPFVPLPDAERQDYARTIMERFGNP
YIRHELIAIALNSVSKWQVRVLPSLKDYAAAHGEAPDGLSFSLAALLRFYKGTLAADGAC
TGTRDAGPYPIRDDAAVLTALSGAWAAHGGDPAALVDAVLSNAALWGEDLTRIPGLAHRT
AVHLAVIEERGMRGALEALVS