PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Ac3H11_1496 Aldehyde dehydrogenase (EC 1.2.1.3) (500 amino acids)

SeqID: Ac3H11_1496 Aldehyde dehydrogenase (EC 1.2.1.3)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595944: probable aldehyde dehydrogenase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Ac3H11_1496 Aldehyde dehydrogenase (EC 1.2.1.3)
MNPFDLSSQQLQGAKFLSERRVGNVIGGVSGPALSGRWLPVTDPATEMVVAEAPDSDAAD
IARAVASAQRAFDSHVWRGLRPADREKLLFRLSELIERHADELSALETLQSGKLQGIARA
IDVQAGAEFVRYMAGWATKLEGQTLDNSIPIPGPQWVTYTRREPVGVVGAIVPWNFPLAI
ALWKIAPALAAGCTVVLKPSEDTPLTALRLAHLALEAGIPEGVLNVVCGRGATAGAALIA
HPGVRKLSFTGSTAVGKVVGHAAVENMARFTLELGGKSPAVVMEDADPSQVAQGIATGIF
FHQGQVCTASSRLLVHRSLYRRVLDELAGIAQGMRIGSGFDAATQFGPLTSKAHFARVMD
FIASAKAEGATLVAGGERVHDAGCFVQPTIFADTTAQMRVVREEVFGPVLAVAPFDDVED
AIAAANDTPYGLAASLWTQSLSHAHRIVPRLQAGVVWVNAHNVLDAGLPLGGIKQSGTGR
DLGRAAVEGFTELKSVCMAV

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory