PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Ac3H11_2497 Alcohol dehydrogenase (EC 1.1.1.1) (378 amino acids)

SeqID: Ac3H11_2497 Alcohol dehydrogenase (EC 1.1.1.1)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 462590: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Ac3H11_2497 Alcohol dehydrogenase (EC 1.1.1.1)
MAFIYYVTQIQFEFGAVQLLKQECGRVGITRPLIVTDPGVKAAGVLQKALDALPGMTVAV
FDQTPSNPTEAAVRAAVEMYKAQGCDGLIAVGGGSAIDCAKGIAIAATHEGPLTHYATIE
GGSPRITDRAAPLIAVPTTSGTGSEVARGAIIIVDDHRKLGFHSWNLVPKTAICDPELTL
GLPPMLTAATGMDAIAHCMETFMSAAFNPPADGIALDGLTRGWANIEQATKNGSDRDARL
HMMSASMQGAMAFQKGLGAVHSLSHSLGGVNPRLHHGTLNAMFLPAVVRFNAQAESVQKE
KRLERMAHAMGLASAGDIPEAIRDMNARLGLPTGLAAMGVNEAMFDDIIKGAMADHCHKT
NPRIATPEEYRDMLAQSR

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory