PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Ac3H11_2750 FitnessBrowser__acidovorax_3H11:Ac3H11_2750 (466 amino acids)

SeqID: Ac3H11_2750 FitnessBrowser__acidovorax_3H11:Ac3H11_2750
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15597279: probable ring-hydroxylating dioxygenase subunit[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Ac3H11_2750 FitnessBrowser__acidovorax_3H11:Ac3H11_2750
MLSPTPPTLSDGTKVVDLVNVNTREVQMRALSDPELYELEMERIFGKIWVFLGHESEIPN
SGDFVTRDMGSDSVLVTRDKSGEVHVLLNLCTHRGMRVSTLDAGNTQIHTCIYHGWAFRP
NGAFLGAPVEKETMHGKMMSKEELGLKKARVTLYGGLIFATWNIDGPSFEEFLGDAKWYY
DILFKRTDKGMEVLGPPQRFTVRANWKAAGEQSAADGYHTLTLHRWLGEVGNYSKKGEGE
GSGGDLSPEMYGVEVSSPHGHALRCIDLGRKIRRMTGLDPDVLSVDEKLNALPPAGMTKE
MVEQLKRNLTPEQLHVQTSMPPQVGGIFPNVLFGFVYIPQADGSVVGSMTMHAYVPKGPD
KLEFVNWIFAEKDAPQELRDKMLRQTIQLFGTSGMVEQDDSDTWPHMTLAAKGAQGKKMT
LKYQAVYETGAPKGWPGPGIVNEGFTKDDTQWHWWLYWRQLMGDAV