PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Ac3H11_4666 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) (400 amino acids)

SeqID: Ac3H11_4666 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        CytoplasmicMembrane           [matched 1171003: Probable phosphoribosylglycinamide formyltransferase 2]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    7.88
    Cytoplasmic            2.11
    Periplasmic            0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    CytoplasmicMembrane    7.88

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Ac3H11_4666 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-)
MTTLGTPLSPHATKVMLLGSGELGKEVLIALQRLGVETIAVDRYDNAPGQQVAHHARTIT
MSDPAQLKALIEAERPHLVVPEIEAIATPMLEELEAAGTVRVIPTARAARLTMDREGIRV
LAAETLGLPTSPYKFCNSLEELQAAIDAGIGYPCIVKPVMSSSGKGQSKIDVPEDVQKAW
DYAMAGGRVSHGRVIVEGFIDFDYEITQLTVRSVGAEGQIVTSFCDPIGHVQVSGDYVES
WQPHPMHPAALEKSRQIAKAVTDNLGGQGLFGVELFVKGENVWFSEVSPRPHDTGLVTLC
TQHQSEFELHARAILGLPVDTRLRNPGASAVIYGGVEAQGIVFDGVEEALRVPGTDLRLF
GKPESFVKRRMGVALARAEDVDTARHNAKLAAGKVTPRKA