PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BPHYT_RS05370 FitnessBrowser__BFirm:BPHYT_RS05370 (479 amino acids)

SeqID: BPHYT_RS05370 FitnessBrowser__BFirm:BPHYT_RS05370
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595944: probable aldehyde dehydrogenase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BPHYT_RS05370 FitnessBrowser__BFirm:BPHYT_RS05370
MEEARHFIGGEWSAASGGETIAVLDPSDGQPFTQLARGTAADIDAAVHAARRAFEGPWGQ
ASAAERGRILYRLSMLVAARQEELAQLEARDTGKPLKQARADSAALARYFEFYAGAADKL
HGETLPYQTGYTVLTIREPHGVTGHIVPWNYPMQIFGRSVGAALATGNACVVKPAEDACL
SVLRVAELAAEAGLPAGALNIVTGFGHEAGAALARHPGIDHISFTGSPDTGKLVTQMAAE
NHVPVTLELGGKSPQIVFADADLDAALPVLVSAIVQNAGQTCSAGSRVLIDRAIYEPLLD
RLSSAFHALRVGPSQADLDCGPLISAKQQRRVWDFLSDAQHDGIAMAAHGEVIPEAPESG
FYQAPTLLRDVPASHRLARDEVFGPVLAAMSFSDEDEALTLANGTPFGLVAGIWTRDGAR
QMRLARRLRSGQVFINNYGAGGGVELPFGGVKHSGHGREKGFEALYGFTALKTIAIKHG