PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BPHYT_RS07410 FitnessBrowser__BFirm:BPHYT_RS07410 (605 amino acids)

SeqID: BPHYT_RS07410 FitnessBrowser__BFirm:BPHYT_RS07410
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 3915705: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BPHYT_RS07410 FitnessBrowser__BFirm:BPHYT_RS07410
MCGIVGAVAQRNIVPVLIEGLRRLEYRGYDSCGVAVLAAAGPRRARSTARVADLDAQTRE
THLEGGTGVAHTRWATHGAPVTDNAHPIFSKDELALVHNGIIENYEPLREMLRAKGYVFV
SQTDTEVVAHLVHSLYRGDLFEAVREAVKQLDGAYAIAVEHKAHPHLVVGARQGSPLVVG
IGEGENFLASDALALAGETERFIFLEEGDVCELTLERVRVVSRDGIDVEREVRTVAAYGG
GVELGPYRHFMQKEIFEQPRAIADTVPQGESLDASLFGEEAAAVFADIDSLLILACGTSY
YSGLTAKYWLESIAKIPTQVEIASEYRYRDSVPNPKALVVVISQSGETADTLAALKHAQS
LGHKHTLSVCNVATSAMVRLTSLSFHTHAGREIGVASTKAFTTQLVGLFVLAATLGKIRG
TVSPEQEADYVRQLRHLPAALNAVLALEPQIIAWSEKFSGKESALFLGRGSHYPIALEGA
LKLKEISYIHAEAYPAGELKHGPLALVTDAMPVVTIAPNDALLEKLKSNLQEVKARGGEL
YVFADTDTRIGSEPGIHVIRMPEHYGPLSPLLHVVPLQLLAYHTACARGTDVDKPRNLAK
SVTVE