PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BPHYT_RS10690 FitnessBrowser__BFirm:BPHYT_RS10690 (427 amino acids)

SeqID: BPHYT_RS10690 FitnessBrowser__BFirm:BPHYT_RS10690
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15597708: anthranilate dioxygenase large subunit[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BPHYT_RS10690 FitnessBrowser__BFirm:BPHYT_RS10690
MSESSYQTVDASALYQRVQSDRVAPSLYYDPAVFEAELERIFYKTWIWVAHESELPNPGD
FRTTTIGRQPVIVVRDKSGAVNVLQNRCRHRGATVCEQHKGNAKGFTCPYHSWTYGLDGT
LRALPYGDGYEGVVDKTELPLASLRVGIYQGLIFASFNQEIEPLEDFLGGAKPWIDLFMK
QGAGYPIKANGEHRFRFNGNWKIQLENTTDLYHFPVVHKSWMKSIDDETAAAITSFMTSD
QAFCRSLGNGHSLAVLVPEIVDLDKDDGAPIPERFEELAASLARDHTPEEVRRIVRSLMG
VGFNLNLFPNLALSMAFFRVLRPISANETEIRHVALAMDGGPEEANRVRLRIHEHFQGPF
GFGSPDDAEAWERVQRGSHAGPDLPILVNRGLNRESTAPNGEKTAHATDETGMREAYAQW
RTMMEQA