PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BPHYT_RS21705 FitnessBrowser__BFirm:BPHYT_RS21705 (610 amino acids)

SeqID: BPHYT_RS21705 FitnessBrowser__BFirm:BPHYT_RS21705
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 39932462: Sulfoacetaldehyde acetyltransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BPHYT_RS21705 FitnessBrowser__BFirm:BPHYT_RS21705
MSEQNPSPRDATADNRASGPQAMTPSEAFVETLAANGVTDMFGIMGSAFMDAMDIFAPAG
IRLIPVVHEQGAGHMADGYSRVSGRHGVVIGQNGPGISNCVTAIAAAYWAHSPVVIVTPE
AGTMGIGLGGFQEAKQLPMFQEFTKYQGHVTHPARMAEFTGRCFDRAMAEMGPTQLNIPR
DYFYGQVKVEIPQPQRLDRGAGGEQSLNEAAELLAQAKFPVIISGGGVVMADAIEECKAL
AERLNAPVVNSYLHNDSFPANHPLWCGPLGYQGSKAAMKLLSRADVVIALGSRLGPFGTL
PQHGMDYWPTNAKIIQIDADHKMLGLVKKISVGICGDAKAAAVALTERLAGRKLASDATR
EERGAQIASEKAAWEKELDDWTHERDAYSLDMIEEQKQERTPGGGTYLHPRQVLRELEKA
MPEDVMVSTDIGNINSVANSYLRFNKPRSFFAAMSWGNCGYAFPTIIGAKVAAPHRPAVS
YAGDGAWGMSLMETMTCVRHNIPVTAVVFHNRQWGAEKKNQVDFYNRRFVAGELDNQSFA
AIARAMGAEGIVVDRLEDVGPALKRAIDAQMNHGKTTIIEIMCTRELGDPFRRDALSKPV
RMLDKYKDYV