PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BPHYT_RS22765 FitnessBrowser__BFirm:BPHYT_RS22765 (660 amino acids)

SeqID: BPHYT_RS22765 FitnessBrowser__BFirm:BPHYT_RS22765
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    2.00
    Cytoplasmic            2.00
    OuterMembrane          2.00
    Periplasmic            2.00
    Extracellular          2.00
  Final Prediction:
    Unknown

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BPHYT_RS22765 FitnessBrowser__BFirm:BPHYT_RS22765
MRLGVCYYPEHWPESMWQDDARRMKALGIEQVRIAEFAWSRIEPTPGEYDWGWLDRSIDV
LGAAGLQVVMCTPTATPPKWLIDRHPDILPVGADGRPRAFGSRRHYDFSSPSYFAASQKI
CTAVAERYGKHPAVAYWQTDNEFGCHHTVVSYSPAAVGRFREWLKARYQTIDALNRAWGT
VFWSMEYRSFDEIDAPVATVTEAHPSHRLDYRRFASDEVARYNRMQVEIIRAHSPGRPVA
HNFMQLFTEFDHYKVAADLDVATWDSYPLGALEEQWFAPEVKARWLRSGHPDFASFNHDV
YRGMSKLPFWVMEQQPGPVNWALWNPAPLPGMVRLWSWEAFAHGAGCVSYFRWRQAPFAQ
EQMHAGLNTPDNRLDVGGNEASQVAGEIRTVLAANADADAAVRSKVALVYDYEAKWLFEI
HPQGADFHYPRFAFEYYSALRALGLDVDVVPVDAPLDGYSLIVVPPLPVVPEAFAQRLAS
SGAQVVLGPRTGSKTKDLQIPANLPPGALTSVLPLRVWRVESMRPNVTEAVRLADGESAG
EADGFARHWRDFIDTDAAQSLDVRARFADGHPAYVQGGAFHYLASLFDDALTVRLFARIA
QEAGLETMPLGDSVRVSRRGALTYVFNYGDETHTLSGVADDALVFGSRAIEPQGVAVYRS