Running PSORTb v3.0 on BWI76_RS00250 FitnessBrowser__Koxy:BWI76_RS00250 (330 amino acids)
SeqID: BWI76_RS00250 FitnessBrowser__Koxy:BWI76_RS00250 Analysis Report: CMSVM- Unknown [No details] CytoSVM- Cytoplasmic [No details] ECSVM- Unknown [No details] ModHMM- Unknown [No internal helices found] Motif- Unknown [No motifs found] OMPMotif- Unknown [No motifs found] OMSVM- Unknown [No details] PPSVM- Unknown [No details] Profile- Cytoplasmic [matched PS50862: AA_TRNA_LIGASE_II Profile - Cytoplasmic ] SCL-BLAST- Cytoplasmic [matched 114262: Aspartate--ammonia ligase] SCL-BLASTe- Unknown [No matches against database] Signal- Unknown [No signal peptide detected] Localization Scores: Cytoplasmic 10.00 Periplasmic 0.00 CytoplasmicMembrane 0.00 Extracellular 0.00 OuterMembrane 0.00 Final Prediction: Cytoplasmic 10.00 -------------------------------------------------------------------------------
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict transmembrane helices and signal peptides: Phobius
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>BWI76_RS00250 FitnessBrowser__Koxy:BWI76_RS00250 MKTAYIAKQRQISFVKSHFSRQLEEKLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVK TLPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLTAIHSVYVDQWDWE RVMGDEERHCGTLKATVEAIYAGIKATEDAVSKEFGLTPFLPETIHFVHSQELLSRYPDL DAKGRERAIAKELGAVFLIGIGGKLSDGQRHDVRAPDYDDWSTPAAEGYAGLNGDILVWN PVLEDAFELSSMGIRVDAEALKRQLAMTGDEDRLKLEWHQALLRGEMPQTIGGGIGQSRL TMLLLQLDHIGQVQCGVWPTQVRQSVAALL
Lawrence Berkeley National Laboratory