PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS02900 FitnessBrowser__Koxy:BWI76_RS02900 (383 amino acids)

SeqID: BWI76_RS02900 FitnessBrowser__Koxy:BWI76_RS02900
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Extracellular                 [No details]
    ModHMM-           Unknown                       [1 internal helix found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Periplasmic                   [matched 15599399: periplasmic gluconolactonase, PpgL[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    Extracellular          5.02
    Periplasmic            4.91
    OuterMembrane          0.07
    CytoplasmicMembrane    0.00
    Cytoplasmic            0.00
  Final Prediction:
    Unknown (This protein may have multiple localization sites.)

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Other sequence analysis tools

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Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS02900 FitnessBrowser__Koxy:BWI76_RS02900
MPTARHLLVASLSLLAAGAAAQTHYAWVGTYNPNGEGLYRFTVDSQTGALRDKALVAKLP
NLAQLAVSADGKTLYAASEVDKGVVQAWRIGSNGELSELNQVASGGAGPVYLSLTPDGRH
LLVANYVSGSIAVLPVKEEGNLGEAVDIHQDQGPAGAERPAAAVEGSFAISDHNGPHAHM
VAADPSGRFVYSTDLGLDRIYQYRLDNASGKLTPNDPPFIDASSPGAGPRHFVFTPQGDG
LWLINEEASTLTFYHLDKQSGLLREGKTVSALPEEYKGTSFAAGLVLSRDGKQLYVANRL
HNSIAHFTVLADGSLSHQEDIWTRGDYPRTLTLDSQEQWLYVMNQRSDNITRFRVAPKDG
RLTFSPDYTPVGGPSQMVISAQP