PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS06990 FitnessBrowser__Koxy:BWI76_RS06990 (593 amino acids)

SeqID: BWI76_RS06990 FitnessBrowser__Koxy:BWI76_RS06990
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15599890: acetolactate synthase large subunit[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS06990 FitnessBrowser__Koxy:BWI76_RS06990
MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEG
YTRATAGNIGVCLGTSGPAGTDMITALYSASADSVPILCITGQAPRARLHKEDFQAVDIE
SIAKPVTKMAVTVREAALVPGVLQQAFHLMRSGRPGPVLIDLPYDVQVAEIEFDPELYAP
LPAYKPVATRPQIERALAMLLMAERPVIVAGGGVINADAAALLQQFAEITHVPVIPTLMG
WGCIPDDHELMAGMVGLQTAHRYGNATLLASDLVFGIGNRFANRHTGSVEKYTAGRKIIH
IDIEPTQIGRVLCPDLGIVSDAKAALTQLVDIAQQMQKEGRLPRRERWVAECQERKRTLL
RKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGP
LGWTLPAALGVCAADPERNVVAISGDFDFQFLIEELAVGAQFNIPYVHVLVNNAYLGLIR
QSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKA
WMKEYRVPVVVEVILERVTNISMGSELDNVMEFEDVADSAIDAPTETCFMKYE