PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS07225 FitnessBrowser__Koxy:BWI76_RS07225 (335 amino acids)

SeqID: BWI76_RS07225 FitnessBrowser__Koxy:BWI76_RS07225
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Periplasmic                   [matched 59802551: Glucose--fructose oxidoreductase precursor]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    Periplasmic            9.76
    CytoplasmicMembrane    0.12
    Extracellular          0.11
    OuterMembrane          0.00
    Cytoplasmic            0.00
  Final Prediction:
    Periplasmic            9.76

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS07225 FitnessBrowser__Koxy:BWI76_RS07225
MTCIRFALLGSGFIGQVHAASLARHERTVLSMVADADPERAKALASRYGARAVTVAEAIN
SDAIDAVLIASSTPSHAALLAAAARAGKAVYCEKPIDLSLARARQVVEKVLPLGVPVTVG
FNRRFDASHQQLRREIEAGVIGKIELVQMVCRASIMPPLEYLRSSGGQMRDQAIHFFDLL
RFLTGDEVTTVAAMGDALALAEIAEFDDVDTSILMLRMRGGAMAQLDNTRRTGHGYDERI
SLLGSDGVLESGSQTTRGVTLWQGERRIQPGLYPDWFSRVEGSYYAHLDAFVRSLGGEEV
ADLPGLLDGLRAQAIAEAAVLSLQQGQFVSVEPLA