Running PSORTb v3.0 on BWI76_RS16775 FitnessBrowser__Koxy:BWI76_RS16775 (360 amino acids)
SeqID: BWI76_RS16775 FitnessBrowser__Koxy:BWI76_RS16775 Analysis Report: CMSVM- Unknown [No details] CytoSVM- Unknown [No details] ECSVM- Unknown [No details] ModHMM- Unknown [No internal helices found] Motif- Unknown [No motifs found] OMPMotif- Unknown [No motifs found] OMSVM- Unknown [No details] PPSVM- Unknown [No details] Profile- Unknown [No matches to profiles found] SCL-BLAST- Cytoplasmic [matched 15596449: probable L-malate dehydrogenase[Pseudomonas aeruginosa PAO1]] SCL-BLASTe- Unknown [No matches against database] Signal- Unknown [No signal peptide detected] Localization Scores: Cytoplasmic 9.26 Periplasmic 0.48 CytoplasmicMembrane 0.24 Extracellular 0.01 OuterMembrane 0.01 Final Prediction: Cytoplasmic 9.26 -------------------------------------------------------------------------------
PaperBLAST (search for papers about homologs of this protein)
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Predict transmembrane helices and signal peptides: Phobius
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>BWI76_RS16775 FitnessBrowser__Koxy:BWI76_RS16775 MQTGHRFQATDLHQFVKTLFTHMGSSPTEASLIADHLIAANLAGHDSHGVGMIPSYVRSH AQGYLQLNRHASVMKDAGAVVTLDGNGGFGQVVAHEAMQIGIEKAKQHGLAAVALRNAHH IGRIGYWAEQCAAAGMISIHFVNVVGNVMVAPFRGKDSRFGTNPLCVVFPRVGHPPLLLD YATSAIAFGKTRVAWHKGVPVPAGSLIDARGVPTTDPAVMQTSPLGALLTFAEHKGYALA TLCEAIGGAVSGGKTSHQETLQGSVDAIFNCMTTIILSPEAFDAPDMQRETEAFIDWCKQ SPHEPDAPILAPGEWEEANRRQRLAQGIPLDAGSWQAICAAAEEVGVPADTLAQLRQKLA
Lawrence Berkeley National Laboratory