PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS19755 BWI76_RS19755 fructuronate reductase (488 amino acids)

SeqID: BWI76_RS19755 BWI76_RS19755 fructuronate reductase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 61252084: Polyol:NADP oxidoreductase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS19755 BWI76_RS19755 fructuronate reductase
MTTIATATLPEGVQLPQYDRSQLRSRIVHFGFGAFHRAHQALLTDRVLNAGGGDWGICEI
SLFSGDRLMSQLRQQDHLFTVLEKGAEGNQPIVVGAVHECLNAKLDSLAAIIEKFCEPQV
AIVSLTITEKGYCIDPASGLLDMTQPRIIHDLQNPTLPQSVPGILVEALSRRRQRELPPF
TVLSCDNIPNNGHVVKNAVLGMAEKRSPELAQWIAERVSFPGTMVDRIVPAATDESLAEI
SAALGVEDPCAISCEPFIQWVIEDNFVAGRPAWETAGVQMTDDVLPWEQMKLRMLNGSHS
FLAWLGYLAGHAHISDCMQDPIFRSAAYRLMLDEQAPTLSIQGVDLTAYADSLIERFSNP
ALKHRTWQIAMDGSQKLPQRMLDGIRVHLAQGSHWPLLALGVAGWMRYVSGIDDGGNAID
IRDPLADKIQKLVSASDEHQRVAALLTLEEIFGRDLPQDPQFVAYITAAWHQLAAFGARQ
AIAGTLNA

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory