PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS19965 BWI76_RS19965 sn-glycerol-3-phosphate dehydrogenase subunit A (540 amino acids)

SeqID: BWI76_RS19965 BWI76_RS19965 sn-glycerol-3-phosphate dehydrogenase subunit A
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic, CytoplasmicMembrane[matched 71159379: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (G-3-P dehydrogenase)]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.12
    CytoplasmicMembrane    0.88
    Periplasmic            0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic (This protein may have multiple localization sites.) 9.12

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS19965 BWI76_RS19965 sn-glycerol-3-phosphate dehydrogenase subunit A
MADSREYDVIIIGGGATGAGIARDCALRGLKAALVERYDIATGATGRNHGLLHSGARYAV
TDSESARECISENRILRRIARHCIEPTSGLFITLPEDDPAYQHTFITACQQAGIEAQPLT
PAETLRLEPAVNPALLGAVQVPDGTVDPFRLTAANMLDAREHGATILTGCEVTGLLREGD
RVQGVALYDRQRREPLSLRAQVVVNAAGIWGQRIAEYADLRIAMFPAKGSLLILDHRINR
QVINRCRKPADADILVPGDTISLIGTTSMHIPYDEIDDNRVTAGEVDTLLREGEKLAPIM
GRTRILRAYSGVRPLVASDDDPSGRSVSRGIVLLDHAQRDGMEGFITITGGKLMTYRLMA
EWATDAVCRKLGNTAPCTTADAPLPGSQEPTETTLRKIIALPASLRGSAIYRHGDRTPAW
LGDSRQHRSLVCECEAVTAGEVQYAVENLAVKNLLDLRRRTRVGMGTCQGELCACRAAGL
LARFNVTTSARSLTQLSEFLNERWKGVQPVAWGDALRESEFTRWVYLGLCGLQKEHQDEV