PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS23010 FitnessBrowser__Koxy:BWI76_RS23010 (507 amino acids)

SeqID: BWI76_RS23010 FitnessBrowser__Koxy:BWI76_RS23010
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15596474: cobyric acid synthase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS23010 FitnessBrowser__Koxy:BWI76_RS23010
MTLAIMLQGTASDVGKSVLVAGLCRIFYQDGQRTAPFKSQNMALNSGITPDGKEMGRAQI
FQAEAAGITPDVRMNPVLLKPTSDRKAQVVLMGKVATDMDAVSYHEYKPRLREQILSVYN
SLAAEHDVLVLEGAGSPAEINLRDRDIVNMGMAEMAQCPVILVADIDRGGVFASIYGTLA
LLHGHERARVKGVIINKFRGDVALLYSGIEQIEALTGVPVLGVMPWLDVDLEDEDGVALQ
KGKYLRTDRRDIEIAVVQLPHIANFTDFNALAAQPDVRVRYVRQPQELAGVDMIILPGSK
NTLGDLRWLRESGMAHAVLQARRHGVPVQGICGGYQMLGETIIDEVESGLGTQPGLGLLN
TVTHFAQHKTTTQVTATLAPGLPAWLAATAGLAVRGYEIHMGETELRDGCRSLMQLHKNG
LSVADGAVSDDGLAFGTYLHGLFDSDEFTRALVNGLRQRKGLAALDSDFEYAQYKSRQFD
LLADAMRQHIDIEKIYAIMRQHQEPIC