PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on BWI76_RS27590 FitnessBrowser__Koxy:BWI76_RS27590 (772 amino acids)

SeqID: BWI76_RS27590 FitnessBrowser__Koxy:BWI76_RS27590
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    2.00
    Cytoplasmic            2.00
    OuterMembrane          2.00
    Periplasmic            2.00
    Extracellular          2.00
  Final Prediction:
    Unknown

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>BWI76_RS27590 FitnessBrowser__Koxy:BWI76_RS27590
MKISDGNWLIQPGLNLIQPVQVYEVEQQGNEMVVYVASREVRERAAQLDVPLFTVRFFSP
QEGVIGVRMEHFQGALNNGPHYPLNVVKDVKVEIHNGAEFAELKSGNLTARVTKGDFWSL
DFLRDGVRITGSQLKNDGYVQDTKTNRNYMFERLDLGVGDTVYGLGERFTALVRNGQTVD
TWNEDGGTSTEQSYKNIPFYLTNRGYGVLVNHPERVSFEIGSEKVSKVQFSVEGEHLEYF
VIDGPTPKEVLNRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNRFIDGMAERNLPL
HVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIKRLKEKGLKVCVWINPYIGQRSPVFKEL
QEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPQACQWYADKLKGLVAMGVDCFKTDFGER
IPTDVQWFDGSDPQKMHNHYAFIYNELVWNVLKETVGEKEAVLFARSASVGAQQFPVHWG
GDCYANYESMAESLRGGLSIGMSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLH
GSKSYRVPWAYDDESCDVVRHFTQLKCRMMPYLYRQAALANEFGTPMLRSMMLEFPHDPA
CDYLDRQYMLGDSVLVAPVFSEAGDVQFWLPEGRWTHLWRNDEAQGSRWHKQNHDVLSLP
VYVRDNTLLALGNNDQKPDYAWNEGTAFQLFNLDDGREAVCQVPAADGSVVFTLKAKRQG
NAITVCGEGKASGWTLCLRNIQQVAGVQGGAQAGSELGVVVTAQGNALTITL