PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on CA265_RS02480 FitnessBrowser__Pedo557:CA265_RS02480 (620 amino acids)

SeqID: CA265_RS02480 FitnessBrowser__Pedo557:CA265_RS02480
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Non-Cytoplasmic               [Signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    4.90
    Periplasmic            2.50
    Extracellular          2.50
    OuterMembrane          0.10
    Cytoplasmic            0.00
  Final Prediction:
    Unknown (This protein may have multiple localization sites.)

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>CA265_RS02480 FitnessBrowser__Pedo557:CA265_RS02480
MYLFNTIRAVILALLFTIPVFAQETHTFALGDDAFLLDGKPFQMISGEIHYPRIPREAWR
SRMKMAKAMGLNTIGTYVFWNLHEPQKGIFDFKGNNDVAEFVRIAKEEGLWVILRPSPYV
CAEWEFGGYPYWLENEKGLVVRSKDPLYLKEYEKYIMEVGKQLAPLQVNHGGNILMVQIE
NEYGSYGSDKEYLSINQKLFIKAGFDGLLYTCDPAPDLTNGYLPGLLPAVNGLDNPEKVK
KLIADHHNGKGPYYIAEWYPAWFDWWGAPHHTVPAARFTGKLDSVLAAGISINMYMFHGG
TTRGFMNGANFKDETPYEPQISSYDYDAPLDEAGNATAKFHAFRSIIQKHLPAGTTLPPV
PNPKPAIRIPTIKLGLTASLTGNLSKGTYHDSPLTFEELLQDYGFVLYRTTLTGGIKGTL
KIKELRDYALIMVNGKQIATLDRRLNQDSLNISLPQGKVVLDILVENLGRINFGKYLLQN
RKGITGYVSFNNRKIKGWTMYRFPFNDLSKIKYQSTVKAGNTPVIKKGTFNLTAIGDTYL
DMRKWGKGMVWVNGHNLGKYWSIGPQETLYLPAEWLRKGVNSIEVLELLRPNQNEITGID
HPLLDGIDHSVPDHLPRKID