PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on CA265_RS15090 CA265_RS15090 NAD kinase (293 amino acids)

SeqID: CA265_RS15090 CA265_RS15090 NAD kinase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 61229965: Inorganic polyphosphate/ATP-NAD kinase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>CA265_RS15090 CA265_RS15090 NAD kinase
MRIAIYGRDFNDTVLPYVQEVFNHLAEHHIQPVLYSKFKTSLHGKIKLPANTVIFHNHTE
LKELADVLLSLGGDGTLLDTLSLIRNSGIPVIGINFGRLGFLASINKNEIASALKALINK
EYTLDSRSLLTLESDNGLFGEENFALNDITIHRRDNSAMMIIHASMNDEFINSYWADGLI
IATPTGSTAYSLSCGGPIIYPDSENFVITPIAPHNLNVRPVILPDDNKLSFEVEARESKF
LVSCDSRTVTVERSVKISIKKADFCVNLIRLNNETYLNTLRNKLLWGIDTRNY

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory