PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on CA265_RS19160 FitnessBrowser__Pedo557:CA265_RS19160 (612 amino acids)

SeqID: CA265_RS19160 FitnessBrowser__Pedo557:CA265_RS19160
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 62297827: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>CA265_RS19160 FitnessBrowser__Pedo557:CA265_RS19160
MCGIVGYIGYREAWPIVLKGLKRLEYRGYDSAGIALMNNSGQHIYKKAGKVAVLEEFAEA
HDKSGTSGMGHTRWATHGVPSDRNSHPHTSNNGKLSIIHNGIIENYATLKEELTNRGHEF
KSDTDTEVLIHLIEEIQEIENIDLLEAVRLALREVNGAYAIVIMDKEHPDRLIAARKGSP
MVIGVGNGEYFIASDATPIIEYTKNVIYLKDGEIALMTREDLLIKQLDNVVQTPLIQELE
LKLEMLEKGGFDHFMLKEIYEQPRSIKDCMRGRIYPEEGKVQLGGIKEFAEKLKNIDRII
IVACGTSWHAGLVGEYLIEEYARIPVEVEYASEFRYRNPIITEKDVVIAISQSGETADTM
AAIEMAKERGATIFGICNVAGASIPRLTHAGVYTHAGPEIGVASTKAFTAQVTVLTLMAF
YMAQQKGTITTSKLIELLTELDNIPEKIQVALESNDLIKEVAEKIKDSTNCLFLGRGSGF
PVALEGALKLKEISYIHAEGYPAAEMKHGPIALIDEEMPVVFIATQNSSYEKVISNIQEV
KARKGKVIAIVTQGDTEVKKMADYCIEIPDANEAFLPLIATIPLQLLSYHIAVMRGCNVD
QPRNLAKSVTVE