PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on CCNA_00285 CCNA_00285 acetylglutamate kinase (304 amino acids)

SeqID: CCNA_00285 CCNA_00285 acetylglutamate kinase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15600516: acetylglutamate kinase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>CCNA_00285 CCNA_00285 acetylglutamate kinase
MTDVAEEAGWATAKTLAEALPYIQIYDRETVVIKYGGHAMGQEDVAKVFAADAVLLKLLG
VHPVVVHGGGPQISRMLDKAGVKSTFVDGLRVTDEATMEVAEMVLSGAINKEIANWITLA
GAEADVRGVGLSGKDARLITAEKVTRTKKDPDSNIEQAVDLGFVGEPTKVDPQLIEALLT
SEHDYIPVVAPIGVSPDGDTFNINADTVAGALAGALKAKRMLMLTDIKGVLDGNGELIRE
MTIEQARALIDTGVATGGMIPKLENAIHAIESGVEAVVILDGRRPHAMLVELFSEYGAGT
LIKR