PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Dsui_2241 FitnessBrowser__PS:Dsui_2241 (424 amino acids)

SeqID: Dsui_2241 FitnessBrowser__PS:Dsui_2241
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2500947: Cystathionine gamma-synthase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Dsui_2241 FitnessBrowser__PS:Dsui_2241
MPKLETLAVHAGYSPDPTTKAAAVPIYQTTSYAFDNTQHGADLFDLKVAGNIYTRIMNPT
QDVLEKRVAALEGGIAGLALASGQAAITYAIQTIAEAGDNIVSTATLYGGTYNLFAHTFP
QLGIQVRFADYRDPASFEKLIDGKTKAIYAETIGNPLGNITDIEKLAEIAHRNGIPLIVD
NTVASPFLLRPIEFGADIVVHSLTKYLGGHGNSIGGIIVDSGKFPWAEHKTRFKRLNEPD
VSYHGVVYTEALGPAAYIGRARVVPLRNTGAAISPFNAFLILQGIETAALRMERITDNTI
AVAKYLQSHKKVKWVNYAGLENHPDHALAKKYLGGKPSGILTFGVEGGIEGGTRFQDALQ
LFTRLVNIGDAKSLACHPASTTHRQLNPEELAKAGVTVDTVRLSIGIEHIDDLIADLEQA
LAAV