PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Dsui_2314 FitnessBrowser__PS:Dsui_2314 (279 amino acids)

SeqID: Dsui_2314 FitnessBrowser__PS:Dsui_2314
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 16129178: 3-deoxy-D-manno-octulosonate 8-phosphate synthase [Escherichia coli K12]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Dsui_2314 FitnessBrowser__PS:Dsui_2314
MKLCDFEVGLDQPIFLIAGPCVAESEQLCVDVAGQMKEVCGRLGIPYIFKASYDKANRSS
GKSFRGLGMDAGLKILENVRRQIGVPVLTDVHTEAEVPAVAAVVDVLQTPAFLCRQTDFI
HAVAASGKPVNIKKGQFLAPGDMKNVVDKAREANGGADTIMVCERGASFGYNNLVSDMRS
LAIMRDTACPVVFDATHSVQLPGGQGTASGGQREFVPVLARAAVASGVAGLFMETHPNPA
CAMSDGPNAWPLDRMESLLRVLVGIDRLVKSGPLEELSL