PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Echvi_1449 FitnessBrowser__Cola:Echvi_1449 (426 amino acids)

SeqID: Echvi_1449 FitnessBrowser__Cola:Echvi_1449
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15597276: kynureninase KynU[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Echvi_1449 FitnessBrowser__Cola:Echvi_1449
MSSYRYSLAFAQERDREDPLRKFQSRFHFPKVNGEAAIYFCGNSLGLQPKAVREHLDRDL
ESWASKAVDGHFEGDAPWFSVHERSKAALAEIVGAKKHEVVAMGSLTTNLHALLVSFYQP
NGKRNKILTEAGAFPSDMYALESQVKYHGLDPDEAIVEVGPRPGEHTIRTEDILQAISKH
QDELACVMMAGLQYYTGQVFDMKAIASAAHAVGATVGFDLAHAAGNAPLHLHDWGVDFAA
WCSYKYLNSGPGNVAGIFVHERHGNNPALNRFAGWWGHDEKVRFKMEKGFVPMYGADGWQ
NSNGNVLGMAAHQASLDIFQEAGMVHLRKKSVQLTGFLAFLIREISGESGVLEVITPNAE
AERGCQLSLLIHKGGKAVFDEFYQNGIVGDWRNPNVIRIAPTPLYNSFEDVFRFAKILEQ
SLSKFA