PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Echvi_2919 Echvi_2919 Ornithine/acetylornithine aminotransferase (393 amino acids)

SeqID: Echvi_2919 Echvi_2919 Ornithine/acetylornithine aminotransferase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 39932236: Taurine--pyruvate aminotransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Echvi_2919 Echvi_2919 Ornithine/acetylornithine aminotransferase
MNNRQLFLSNLAQTTDFPLLIEIEKAEGIYMYGPKGEKYIDLISGIGVSNVGHRHPKVLK
AIQDQLDKYMHLMVYGEYVQSPQTQLAKALTDTLPKKLDNVYLVNSGSEAVEGALKLAKR
YTGRREILSCVNAYHGSSHGALSVGGNEIFKRAYRPLLPGIRHLDFNEPDQLDQITEETA
AIMVETVQGEAGIRVGTKEYFKALRHRCDETGTLLILDEIQAGFGRTGKFWAFQHYDIVP
DIVVCAKGMGGGMPIGAFIAPQSIMSVFKNNPLLGHITTFGGHPVSCAAALATIDILRDE
KLIQHVERKANLFKKHLNHPKIQEIRNKGLMMAVKFEAFEVLKPIIDRAIELGIITDWFL
FCEDSMRIAPPLTITDEEIEKACAIILQSIDEN