PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on GFF12 HP15_12 enoyl-CoA hydratase/isomerase (270 amino acids)

SeqID: GFF12 HP15_12 enoyl-CoA hydratase/isomerase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15596826: probable enoyl-CoA hydratase/isomerase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>GFF12 HP15_12 enoyl-CoA hydratase/isomerase
MSLPEKVVESINDAVNVCRDGNVGWVILNRPKQINAINDEIRVGVPEALEQFEKDKEIRV
IVIRGEGERGLCAGADIKERRGPENSLQVRKRMECARWIESIDQTTKPVIVAIHGYCMGG
GLELALACDIRYASPNAVMALPETGLGLIPGGGGTQRLSRVVAPGHALDMLLSGDRLDAA
RARSIGLVTRVAETQESLLQEVSELAQKIAMKPPLATTYVKRAARASLELELKRGLDLEL
DLFALLAPTEDAREAASAFSERRSPNFIGE