PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on GFF2360 PGA1_c23910 fructose-bisphosphate aldolase class 1 (300 amino acids)

SeqID: GFF2360 PGA1_c23910 fructose-bisphosphate aldolase class 1
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    2.00
    Cytoplasmic            2.00
    OuterMembrane          2.00
    Periplasmic            2.00
    Extracellular          2.00
  Final Prediction:
    Unknown

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>GFF2360 PGA1_c23910 fructose-bisphosphate aldolase class 1
MAQETSTQTAQLDRIANGKGFIAALDQSGGSTPKALALYGVTEDAYGNDDEMFGEIQKMR
ARIITAPDFNSDKILGAILFEKTMDAAIDGTPVPAYLWDNCGVVPFLKVDKGLADEADDA
QTMKPMPDLDALLSRAVKAGIFGTKMRSVIKGANATGIKNVVGQQFIVGRQIAAAGLLPI
IEPEVDINSTTKAEAEALLKDAILAELNALPADTKVALKLTIPTEAGLYDDLAAHANVVR
VVALSGGYTTDDACEKLSQNKTMIASFSRALTEGLNVAMSDEDYNAALGSNIDKIYRASI