PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on GFF2451 Psest_2499 citrate synthase I (hexameric type) (423 amino acids)

SeqID: GFF2451 Psest_2499 citrate synthase I (hexameric type)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 3123196: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>GFF2451 Psest_2499 citrate synthase I (hexameric type)
MADKKAQLIIEGAAPVELPVLTGTVGPDVIDVRSLTSTGHFTFDPGFMSTASCESKITYI
DGDKGILLHRGYPIEQLAEKSDYLETCYLLLNGELPTAEQKAQFVSTVKNHTMVHEQLKS
FLNGFRRDAHPMAIMCGVVGALSAFYHDSLDINDPHHREISAVRLVAKMPTIAAMVYKYS
IGQPLMYPRNDLSYSENFLHMMFNTPCEIKPISPVLAKAMDRIFILHADHEQNASTSTVR
LAGSTGANPFACIAAGIAALWGPAHGGANEAVLTMLDEIGDVSNVEKFLAKAKDKNDPFK
LMGFGHRVYKNFDPRAKVMKQTCDEVLGELGINDPQLDLAMKLEEIALNDPYFAERNLYP
NVDFYSGIILKAIGIPTSMFTVIFALARTVGWISHWKEMIASGQKIGRPRQLYTGHTKRD
LPR