Running PSORTb v3.0 on GFF2781 FitnessBrowser__Phaeo:GFF2781 (467 amino acids)
SeqID: GFF2781 FitnessBrowser__Phaeo:GFF2781 Analysis Report: CMSVM- Unknown [No details] CytoSVM- Cytoplasmic [No details] ECSVM- Unknown [No details] ModHMM- Unknown [No internal helices found] Motif- CytoplasmicMembrane [matched PS00192: CYTOCHROME_B_HEME Pattern - Cytoplasmic Membrane] OMPMotif- Unknown [No motifs found] OMSVM- Unknown [No details] PPSVM- Unknown [No details] Profile- Unknown [No matches to profiles found] SCL-BLAST- Cytoplasmic [matched 15600548: glycolate oxidase subunit GlcD[Pseudomonas aeruginosa PAO1]] SCL-BLASTe- Unknown [No matches against database] Signal- Unknown [No signal peptide detected] Localization Scores: CytoplasmicMembrane 5.95 Cytoplasmic 4.05 Periplasmic 0.01 Extracellular 0.00 OuterMembrane 0.00 Final Prediction: Unknown (This protein may have multiple localization sites.) -------------------------------------------------------------------------------
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>GFF2781 FitnessBrowser__Phaeo:GFF2781 MVQATALPRNETGINAVIDVLKQRFGEQLQTGQAIREQHGHTTTWITNQPPDAVVFPTST DEVADIVRTCADYGVPVIPYGTGTSLEGHVNAPAGGICVDMMRMDKILAVHAEDLDVVVQ PGVTREQLNTYLRDQGLFFPIDPGANASLGGMAATRASGTNAVRYGTMKDNVLALEAVMA DGGVIRTAQRAKKSSAGYDMTRLLVGSEGTLGLITELTLRLQGIPEAIRSARCAFRSVDD ACRAVMMTIQYGIPVSRIELLDEMSVRAANAYSGLDLPEMPLLLLEFHGSDAGVVEQADT FAQIAEEFGGFDIAATSTAEERSKLWQARHDMYWASLQLRPGAKGISTDVCVPISKLAEC VSAARSKAEEMNLLAPMVGHVGDGNFHALLLINMDSAEEREAADAYVGWLNELAISIEGT CTGEHGIGQGKRPYLQQELGETTRYMAAIKAALDPENILNPGKILEI
Lawrence Berkeley National Laboratory