PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on GFF3174 PGA1_c32250 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC (494 amino acids)

SeqID: GFF3174 PGA1_c32250 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595944: probable aldehyde dehydrogenase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>GFF3174 PGA1_c32250 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC
MDQTKIDTLRAQPVPCFSHLIDGQQVAASDGATMDVLSPIDGRLLTQIARGTVRDMERAI
ASARAAFEDRRWAGQPPAARKKVLMKWAELIEADALNLAVLGVRDNGTEITMALKAEPGS
AAATIRYYAEALDKIYGEIAPTSSDVLGMVHKEPVGVVGAIIPWNFPMMIGAWKLAPALA
MGNSVVLKPSETASLSLMRMVELALEAGLPPGVLNAVTGEGAVVGEALGLSMDVDVLVFT
GSGQTGRRLMEYAARSNLKRVYLELGGKSPNIVFADAPDLADAAKVTAAGIFRNSGQVCV
AGSRLLVEASIHDAFVEEVAKAAQMMRVGDPLRLDTQIGAINSEAQLARNLQFVARAEVE
GGQIITGGQRLLSETGGSYMAPTIVTGVTPDATLAQEEVFGPVLAVTPFETDAEALRIAN
ATVYGLAGAVWTSGLTRAHRMVQGVRTGVMHVNTYGGADGTVPLGGVGQSGNGADKSLHA
IDKYINLKTAWMKL