PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on GFF3332 HP15_3274 thiazole synthase (269 amino acids)

SeqID: GFF3332 HP15_3274 thiazole synthase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 19858099: Thiazole biosynthesis protein thiG]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>GFF3332 HP15_3274 thiazole synthase
MTETSELQLPEDKPLEIAGRVYQSRLLVGTGKYRDMMETGHAIESSGAEIVTVAVRRTNL
GQNPDEPNLLDVISPSSYTILPNTAGCYTAKDAVRTCKLARELLDGHDLVKLEVLGEEKT
LYPNMTETLVAAEELIKDGFKVMVYCSDDPLLAKRLEEMGCVAIMPLGAPIGSGLGIQNR
YNIRLIVENANVPVLVDAGVGTASDATIAMELGCDGVLMNTAIAQAKDPIRMANAMRLAI
ESGREAYLAGRMPKKLYASASSPIDGTFF