PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on GFF4315 PS417_22100 keto-deoxy-phosphogluconate aldolase (221 amino acids)

SeqID: GFF4315 PS417_22100 keto-deoxy-phosphogluconate aldolase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 584746: KHG/KDPG aldolase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.26
    Periplasmic            0.48
    CytoplasmicMembrane    0.24
    OuterMembrane          0.01
    Extracellular          0.01
  Final Prediction:
    Cytoplasmic            9.26

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>GFF4315 PS417_22100 keto-deoxy-phosphogluconate aldolase
MKSPQPTVSMADKVALIDSLCAKARILPVITIAREQDILPLADALAAGGLTALEVTLRSE
FGLKAIQVLREQRPELCTGAGTVLDRHMLEAAEVAGSQFIVTPGITRDLLEASVHSPIPL
LPGISNASGIMEGYGLGYRRFKLFPAEVSGGVAAIKALGGPFGEVKFCPTGGVGPANIKH
YMALKNVMCVGGSWMLDPEWVKNGDWARIQEVTAEALALLD