PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on Ga0059261_4131 Ga0059261_4131 Ornithine/acetylornithine aminotransferase (398 amino acids)

SeqID: Ga0059261_4131 Ga0059261_4131 Ornithine/acetylornithine aminotransferase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Periplasmic                   [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 39932236: Taurine--pyruvate aminotransferase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Periplasmic            9.80
    Cytoplasmic            0.19
    CytoplasmicMembrane    0.00
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Periplasmic            9.80

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>Ga0059261_4131 Ga0059261_4131 Ornithine/acetylornithine aminotransferase
MTSSLMNVYARAPIAFDRGEGAWLYPVDGGEPYLDCVAGVATNALGHCHPVLVAALEAQA
AKLWHISNMFEMPGQNALAERLTTASFADTVFFTNSGTEAVECAIKVARRYHAARGEPQR
QTVIGFSGAFHGRTYGAMNAAGNPAHLDGFGDRLPGFVHFAVDNWPALALAIADSATAAV
VVEPVQGEGGARAMTEPFLDKLRAACTAHGVLLIYDEVQTGMGRTGKLFAHQWYPDATPD
IMALAKALGSGFPVGACLATAEAASGMVPGVHGTTAGGNPLAMAVAIAAFDEIAKPETLT
HAREVAQHLRAGLDRLAATHPGVISEIRGKGLLVGVRLVPNNRAFMAAAREQRLLVAGGG
DNCVRLLPPLTLTVAEADQILDRLDTACHAMANVQVAA