PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_00127 H281DRAFT_00127 dihydroxyacid dehydratase (557 amino acids)

SeqID: H281DRAFT_00127 H281DRAFT_00127 dihydroxyacid dehydratase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595550: dihydroxy-acid dehydratase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_00127 H281DRAFT_00127 dihydroxyacid dehydratase
MPYNRRSKNITQGVARSPNRSMYYALGYQKEDFDKPMIGIANGHSTITPCNAGLQRLADA
AVAAVKGADANPQIFGTPTISDGMSMGTEGMKYSLVSREVIADCIETCVQGQWMDGVVVI
GGCDKNMPGGMIGLARMNVPGIYVYGGTIRPGNWKGTDLTIVSSFEAVGEFTAGRMSQED
FEGVERNACPSTGSCGGMYTANTMSSSFEALGMSLLYSSTMANPDQEKVDSAAESARVLV
EAVKKDLKPRDIITKKSIENAVAVIMATGGSTNAVLHFLAIAHAAEVEWTIEDFERMRKK
VPVICNLKPSGQYVATDLHKAGGIPQVMKILLDAGLLHGDCITITGKTLAEELKDVPSRP
RADQKVIFPIDQALYKEGHLAILKGNLAEDGAVAKITGLKNPVITGPARVFDDEQSALEA
ILADKIVAGDVVVLRYLGPKGGPGMPEMLAPTSAIIGKGLGESVGLITDGRFSGGTWGMV
VGHVAPEAFVGGTIGLVQEGDSITIDAHKLLLQLNVDDAELQRRRAAWQQPQPRYTRGVL
AKYSALALPANKGAITG