PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_00467 H281DRAFT_00467 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) (562 amino acids)

SeqID: H281DRAFT_00467 H281DRAFT_00467 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 129056: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex)]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_00467 H281DRAFT_00467 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
MSQAIEVKVPDIGDYKDIPVIEVLVKAGDTVEKEQSLVTLESDKATMDVPSSAAGVVKEV
KVKVGDNVSEGSLIVVLDGAGGGAAAPAPAAAPAPAAAPAPAAAPAAAPAPAPAPAAAPA
ATGGGLQDVKVPDIGDYKDIPVIEVAVKVGDRVEKEQSLVTLESDKATMDVPSSAAGVVK
EVKVKVGDTVSEGSVIVVVEAEGAAAAPAPAPAAAPKQQTEKPSDAPVTPSPAPASPSAL
AQAPVIPAGEGGARHPSHASPSVRKFARELGVDVTQVQGTGPKGRITQADVTAFIKGVMT
GQRAAPAGAAAPAAAGGGELNLLPWPKIDFTKFGPVDPKPLSRIKKISGANLHRNWVMIP
HVTNNDEADITELEALRVQLNKENEKAGVKITMLAFVIKAVVSALKKFPTFNASLDGDNL
VFKQYYHVGFAADTPNGLVVPVIRDADKKGLVEIAKEMTDLSKAAREGKLKPDQMQGGCF
SISSLGGIGGTNFTPIINAPEVAILGLSRGAMKPVWDGKQFVPKLMLPLSLSYDHRVIDG
AEAARFNAYLGALLADFRRVIL