PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_00860 FitnessBrowser__Burk376:H281DRAFT_00860 (279 amino acids)

SeqID: H281DRAFT_00860 FitnessBrowser__Burk376:H281DRAFT_00860
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15600153: probable phosphoserine phosphatase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_00860 FitnessBrowser__Burk376:H281DRAFT_00860
MNLVIQSPAPISTDHHKTLVALSRGSHATVVDANAIRISDADIAQRPDLDVYCGTHRLDY
AFVEAGRQLRDFGLVAMDMDSTLITIECIDEIADFCGLKAEVAAITEASMRGEIKDFNES
LTRRVALLKGLDASALERVYEERLQLSPGAEQMLAGAKEAGLKTLLVSGGFNFFTEKLKA
RLGLDFTRANTLDIVDGKLTGKVIGEIVNADVKARTLRETCAQLGIEPSRAIAMGDGSND
LKMMAEAGLSVAFRAKPVVREAASVAFNYVGLDGLLRLF