PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_01409 H281DRAFT_01409 acetate kinase (393 amino acids)

SeqID: H281DRAFT_01409 H281DRAFT_01409 acetate kinase
  Analysis Report:
    CMSVM-            CytoplasmicMembrane           [No details]
    CytoSVM-          Unknown                       [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 2492614: Acetate kinase]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    CytoplasmicMembrane    8.46
    Cytoplasmic            1.33
    Periplasmic            0.21
    OuterMembrane          0.00
    Extracellular          0.00
  Final Prediction:
    CytoplasmicMembrane    8.46

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_01409 H281DRAFT_01409 acetate kinase
MADVILVLNAGSSSIKFSAFDAQTAELACVLRGQIDGLFSSPHFAAFDAAGAQAGAHAWG
DGASLDHAEAIAHIADFLRGHREGHRLTAVGHRVVHGGARFVAPVLVDASVLAELHTLTP
LAPLHQPHNLKPIAIIAERNSAMPQIACFDTAFHATQPEQAKAFALPAAVTERGVRRYGF
HGLSYEYIASRLPEMSPAAAAGRTVVAHLGNGASLCALSACRSVATTMGFTALDGLMMGT
RSGSLDPGVILYLLNELNMTTREVENLLYSQSGLLGVSGISGDMRVLLASDDPRARFAVE
LYVYRICRELGSLIAALKGIDALVFTAGIGEHATQVRQRIGEYAQWCGIDIDSDANQAND
SCISTPTSRVGVWIVPTNEELMIARHTRALIGS