Running PSORTb v3.0 on H281DRAFT_02713 FitnessBrowser__Burk376:H281DRAFT_02713 (313 amino acids)
SeqID: H281DRAFT_02713 FitnessBrowser__Burk376:H281DRAFT_02713 Analysis Report: CMSVM- Unknown [No details] CytoSVM- Unknown [No details] ECSVM- Unknown [No details] ModHMM- Unknown [No internal helices found] Motif- Unknown [No motifs found] OMPMotif- Unknown [No motifs found] OMSVM- Unknown [No details] PPSVM- Unknown [No details] Profile- Unknown [No matches to profiles found] SCL-BLAST- Periplasmic [matched 20141669: Periplasmic protein] SCL-BLASTe- Unknown [No matches against database] Signal- Non-Cytoplasmic [Signal peptide detected] Localization Scores: Periplasmic 9.76 Extracellular 0.11 CytoplasmicMembrane 0.06 OuterMembrane 0.06 Cytoplasmic 0.00 Final Prediction: Periplasmic 9.76 -------------------------------------------------------------------------------
PaperBLAST (search for papers about homologs of this protein)
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Predict transmembrane helices and signal peptides: Phobius
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>H281DRAFT_02713 FitnessBrowser__Burk376:H281DRAFT_02713 MKLTQRFTASALVALAASVGATAHAKDAKDISVAVIPKVAVPFFDDCNKGAKTAAGKAGV KYQWVVPQNTQGSTQVQIIEDLISRHVDGIAISVNEPKSVESVMKRAEQSGIKVLTYDSD SPRSGRSMYIGTNNEQAGATMAETMGKALNGQGEVAIITGQLGAVNLNERIAGIKKGLAK YPGIKIVETQGTDDDLARGVSVVETTLRAHPQLKGIFGVSQVGGPAVAKVLNTKEFGTMK GKLEVLAFDDLPDTLKGLKEGYIQGIMVQRPVTMGSLAVEHLVAQIQGQEAQPKDIDTGV TVVTKDNMTSYTK
Lawrence Berkeley National Laboratory