PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_03046 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating) (469 amino acids)

SeqID: H281DRAFT_03046 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating)
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Unknown                       [No matches against database]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            8.96
    CytoplasmicMembrane    0.51
    Periplasmic            0.26
    Extracellular          0.26
    OuterMembrane          0.01
  Final Prediction:
    Cytoplasmic            8.96

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_03046 H281DRAFT_03046 6-phosphogluconate dehydrogenase (decarboxylating)
MGKQAIGVVGLAVMGRNLALNIESRGHAVSVYNRSREKTDELIAEYPDKKLVPAFTLEEF
VESLEKPRRILLMVKAGEPTDATIASLKPLLEKGDILIDGGNTHFTDTIRRNQELAKAGL
HFIGTGVSGGEEGALKGPSIMPGGQRDAYDLVAPILTEIAAKAPDGEPCVAYMGPDGAGH
FVKMVHNGIEYGDMQLIAESYAVLKQVVGLSNEELGKVYTEWNQGELDSYLIEITSKIFS
KKDEETGKDLVDVILDRAAQKGTGKWTSQNALDLGAPLPLITEAVFARVLSSLKDQRVAA
SKVLDGPSAKPLGAEREAFIESVRRALYFSKVISYAQGFAQLRAASEEYKWDLDFGTIAK
IFRAGCIIRARFLQKITDAYTKEKTIANLLLDPYFRDIASNYQSALREVVVAAINAGVPV
PAFASAVAYFDAYRSERLPANLVQAQRDFFGAHTFERIDKPGSFHANWS

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory