PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_04687 FitnessBrowser__Burk376:H281DRAFT_04687 (357 amino acids)

SeqID: H281DRAFT_04687 FitnessBrowser__Burk376:H281DRAFT_04687
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15596947: Cytoplasmic protein]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_04687 FitnessBrowser__Burk376:H281DRAFT_04687
MPPHNTDDVRIRELKELTPPAHLIREFACDEAVSDLIYNSRTAMHRILHGMDDRLIVIVG
PCSIHDTKAALEYAGRLVEQRKRFAGELEVVMRVYFEKPRTTVGWKGLINDPHMDNSFKI
NEGLRTARELLLRINELGLPAATEYLDMISPQYIADLISWGAIGARTTESQVHRELASGL
SCPVGFKNGTDGNVKIAVDAIKAASQPHHFLSVTKGGHSAIVSTAGNEDCHIILRGGKTP
NYDADSVNAACSDIGKSGLAARLMIDASHANSSKKHENQIPVCADIGRQVASGDERIIGV
MLESHLVAGRQDLQEGCALTYGQSVTDACIGWDESVAVLEGLADAVKQRRVARGSGN