PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on H281DRAFT_05919 FitnessBrowser__Burk376:H281DRAFT_05919 (594 amino acids)

SeqID: H281DRAFT_05919 FitnessBrowser__Burk376:H281DRAFT_05919
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595550: dihydroxy-acid dehydratase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>H281DRAFT_05919 FitnessBrowser__Burk376:H281DRAFT_05919
MTQLNARRLRSQEWFDDPANADMTALYVERFMNYGLTREELQSGRPIIGIAQTGSDLAPC
NRHHIELATRTKAGIRDAGGIPMEFPVHPLAEQSRRPTAALDRNLAYLGLVEILHGFPLD
GVVLTTGCDKTTPACLMAAATVDMPAIVLSGGPMLDGWHQGKRVGSGTVIWHARNLLAAG
EIDYEGFMELTTASSPSIGHCNTMGTALSMNSLAEALGMSLPGCASIPAAYRERGQMAYA
TGKRIVDLVRDDVRPSKIMTKAAFENAIVVASALGASSNCPPHLIAIARHMGVELSLNDW
QRVGEKVPLIVNCMPAGEYLGESFHRAGGVPAVLRELDRAGLVHRDCLTVSGQVIGAIAD
NAAQPDRDVIKTTDEPLKHGAGFIVLSGNFFDSAIMKMSVVGDAFRNTYLSEPGAENSFE
TRAIVFDGPEDYHSRINDPSLNIDQHCILVIRGAGTVGYPGSAEVVNMAPPAELVRQGIT
SLPTMGDGRQSGTSASPSILNMSPEAAIGGGLALLQTGDRIRVDLNTRTVNVLVDEDELA
RRRETVSFDIPPAQTPWQELYRQTVGQLSTGGCLEPATLYLKVIAERGNPRHSH