PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on HSERO_RS19445 FitnessBrowser__HerbieS:HSERO_RS19445 (345 amino acids)

SeqID: HSERO_RS19445 FitnessBrowser__HerbieS:HSERO_RS19445
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595847: anthranilate phosphoribosyltransferase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>HSERO_RS19445 FitnessBrowser__HerbieS:HSERO_RS19445
MPITPQEALLRCIEHREIFHDEMLTLFRQIMSGEMSPVMIAALTMGLRVKKESIGEIAAA
AQVMREFATKVPMADTSRLLDIVGTGGDGAHTFNISTASMFVAAAAGARVAKHGGRSVSS
SSGSADVLEALGADINLQPEQVAQSIAQTGIGFMFAPNHHAAMKHAAPVRKELGVRTIFN
ILGPLTNPAGAPNILMGVFHPDLVGIQVRVLQRLGAQHAIVVWGRDNLDEVTLGGATMVG
ELINGEIREYEIHPEDFGLSMFASRNLQVSNAAESKEKIFEALRGEPGPVHDIVVINAAT
ALYAAGVAPSIAEGLQTARATIASGAARAKLDQFVQVTRQLGGKH