PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on N515DRAFT_1906 FitnessBrowser__Dyella79:N515DRAFT_1906 (1036 amino acids)

SeqID: N515DRAFT_1906 FitnessBrowser__Dyella79:N515DRAFT_1906
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           CytoplasmicMembrane           [3 internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15595759: probable hydrolase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            7.40
    CytoplasmicMembrane    2.58
    Periplasmic            0.02
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Unknown (This protein may have multiple localization sites.)

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Predict transmembrane helices and signal peptides: Phobius

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Input

>N515DRAFT_1906 FitnessBrowser__Dyella79:N515DRAFT_1906
MLDRLASAPAAAVDVVPTSGVGTGMTDPWTLIRRGTDPAGFAQDESLFALANGALGVRGG
LEEGDSPSQASFLSAAWERTPIEYHERFPGFAAHTDTRIPVADATRIQLRLGDVPVRLAE
GEWLDFERRLDLREGCYRRFLRWRSPAGETLEIEAERIVSLDEPGLLALRYRVRSVDYTG
PVTLESAISTARDAAEQGDDPRIGTRLDGGLHTVDAAAEPDFAWVRQQTTHSGIRLACAQ
AHRAQDGGLDCHFANLAQHGVVHSYTGMLTPGQAVTLEKYVAYAWTEPHGDDADDALLAR
TRGILEAAAHLRYAGLLERQRQALAPLWDGADLAIDGDAATEQALRFNLFHLFQSSCRDG
QGSAAAKGLTGEGYEGHYFWDAEAFILPVLATVAPELARGMLLYRHRILDRSRRHARELN
HPRGALYAWRTISGDECSAYYPGGSAQYHINAAIAWAISLYVDASGDTDFLRDHGAEILF
ETARVWLDIGHFNARRGDAFCIHEVTGPDEYSALVDNNHYTNRMAQRHLRDAAATALWMA
GAAPVEYGALCARIGLGEDEVAQWRRAAEAMYLPEDPRLGVFPQDDGFLDRPRLPDHLAA
KPGDGKHPLLLRLHPLTIYRHQVCKQADTLLALMLAGDGVERAAKRRNFDYYESVTVHDS
TLSASTFGVIAAEVGLAAKAWRYFQDSLRVDLDDSHGNAAHGVHMAAMAGSWLGLVWGFG
GFRTIDGQPALAPRLPAAWHGYRFGLRWGRAQLRVEVDASGVRYTLLRGDTLAFRHDGRE
HTIHAGQTLRLPRADAIPNRRAPQPALQAVIFDLDGVIADTAVVHDAAWRRLAQETGLPF
DASIGERLKGVDRMGSLDILLERAGRAYSAEEKLALGERKNDYYREQIQRFGPDQLLPGA
RAAIAAVRAAGLKVGLASASRNAPLLLERLGVAHLFDYIVDAAHIQRSKPDPEIFLAAAA
GLGVAPAACLGVEDAAAGVASIHAAGMAAVGIGQPSALAQAETVLPGLSAFRIEDFISSE
EASRAASGEAASDIAT