PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on N515DRAFT_2936 FitnessBrowser__Dyella79:N515DRAFT_2936 (353 amino acids)

SeqID: N515DRAFT_2936 FitnessBrowser__Dyella79:N515DRAFT_2936
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598361: histidinol-phosphate aminotransferase[Pseudomonas aeruginosa PAO1]]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

-------------------------------------------------------------------------------

Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>N515DRAFT_2936 FitnessBrowser__Dyella79:N515DRAFT_2936
MSVLDLARPELRAMQPYSSARMEASGGAILLNANESAWAPAGEAGRGCNRYPDPQPAALL
RALAALYGVREEQLLVGRGSDEAIDLLVRAFCRAGRDAIAIQPPTFGMYSVCARIQDAGI
VEVPLAADFTVDADALLAALTPAVKLVFVCTPNNPTGQPVPRATIERLARELAGRALLVV
DEAYVEFADGGSVAGLIDTYDNLAVLRTLSKAWALAGARIGTLLAHAEVIALLRKIIPPY
PLPLPCVTAALEGLSAQGQAEAAEHIRIVRAERARMTPALAALPGVREVLPSQANFLAVR
FDDAGAAYQRLFAAGIVVRDVRRYPNLGDALRITIGTPAENARVLDVLNGDRA