PSORTb v3.0 (Gram-negative)

Running PSORTb v3.0 on N515DRAFT_3230 N515DRAFT_3230 xylulokinase (490 amino acids)

SeqID: N515DRAFT_3230 N515DRAFT_3230 xylulokinase
  Analysis Report:
    CMSVM-            Unknown                       [No details]
    CytoSVM-          Cytoplasmic                   [No details]
    ECSVM-            Unknown                       [No details]
    ModHMM-           Unknown                       [No internal helices found]
    Motif-            Unknown                       [No motifs found]
    OMPMotif-         Unknown                       [No motifs found]
    OMSVM-            Unknown                       [No details]
    PPSVM-            Unknown                       [No details]
    Profile-          Unknown                       [No matches to profiles found]
    SCL-BLAST-        Cytoplasmic                   [matched 15598778: |glycerol kinase|4013685 - 4015202]
    SCL-BLASTe-       Unknown                       [No matches against database]
    Signal-           Unknown                       [No signal peptide detected]
  Localization Scores:
    Cytoplasmic            9.97
    Periplasmic            0.01
    CytoplasmicMembrane    0.01
    Extracellular          0.00
    OuterMembrane          0.00
  Final Prediction:
    Cytoplasmic            9.97

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Other sequence analysis tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in the ENIGMA genome browser

Input

>N515DRAFT_3230 N515DRAFT_3230 xylulokinase
MFLGLDLGTSAVKAVLVDAAGAVRAVASQPLTVSHPRPRWSEQDPVDWWRAAVAAIDELL
QAAARDGIPASRVAAIGLSGQMHGATLLDRSDRVLRPAILWNDGRSDAQCRWMETLPDFH
AITGNLAMPGFTAPKLAWVREHEPSVFDAVAKVLLPKDYLRLCLTGDYASDVSDAAGTLW
LDVGKRQWSDPMLAACGLSREQMPGVHEGSESAGRLRAELAERWGMARVPVAAGGGDNAA
GAVGAGIVRHGQAMLSLGTSGVYFAVSDGFLSRPEQAVHSFCHALPGTWHLMSVMLNAAS
CLDYTARLTGHADVGAMLAEAQAAPRRDDGPLFLPYLTGERTPHNDVHATGSFTGLQADT
TRADLANATLEGVGLGLLDGIEAVDAAGLRADRVAVIGGGTRSAYWLQMLADIAGRPLEL
RAGGDVGAALGAARLAHLAAEPGARIDEVCAMPPLVSEYLPDAARHAYYREHRQPRFRDT
YRRLRTATTP